Detailed information of PE_Scaf11163_0.6 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf11163_0.6RIBONUCLEASESuperscaffold51131319411332405-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00773RNBRNB domainDomainInterproscan
PF13086AAA_11AAA domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001900DomainRibonuclease II/RInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR022966Conserved_siteRibonuclease II/R, conserved siteInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR041677DomainDNA2/NAM7 helicase, helicase domainInterproscan
IPR050180FamilyRNR RibonucleaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR23355RIBONUCLEASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000175Molecular Function3'-5'-RNA exonuclease activityInterproscan
GO:0000932Cellular ComponentP-bodyInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004386Molecular Functionhelicase activityInterproscan
GO:0004540Molecular FunctionRNA nuclease activityInterproscan
GO:0006402Biological ProcessmRNA catabolic processInterproscan
GO:0010587Biological ProcessmiRNA catabolic processInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf11163_0.6 global RNA-seq network
TOP