Detailed information of PE_Scaf10825_1.2 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf10825_1.230S/40S RIBOSOMAL PROTEIN S4Superscaffold253971885407628-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF00900Ribosomal_S4eRibosomal family S4eFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000876FamilySmall ribosomal subunit protein eS4Interproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR013845DomainSmall ribosomal subunit protein eS4, central regionInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR038237Homologous_superfamilySmall ribosomal subunit protein eS4, central domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR1158130S/40S RIBOSOMAL PROTEIN S4Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840Cellular ComponentribosomeInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0022627Cellular Componentcytosolic small ribosomal subunitInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf10825_1.2 global RNA-seq network
TOP