Detailed information of PE_Scaf10657_13.9 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf10657_13.9DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBERSuperscaffold26444725764492028-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00488MutS_VMutS domain VDomainInterproscan
PF05192MutS_IIIMutS domain IIIDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000432DomainDNA mismatch repair protein MutS, C-terminalInterproscan
IPR007696DomainDNA mismatch repair protein MutS, coreInterproscan
IPR011184FamilyDNA mismatch repair Msh2-typeInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR036187Homologous_superfamilyDNA mismatch repair protein MutS, core domain superfamilyInterproscan
IPR045076FamilyDNA mismatch repair MutS familyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11361DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBERInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003690Molecular Functiondouble-stranded DNA bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006298Biological Processmismatch repairInterproscan
GO:0030983Molecular Functionmismatched DNA bindingInterproscan
GO:0051026Biological Processchiasma assemblyInterproscan
GO:0140664Molecular FunctionATP-dependent DNA damage sensor activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf10657_13.9 global RNA-seq network
TOP