| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| PE_Scaf10375_0.3 | CLEAVAGE/POLYADENYLATION FACTOR IA SUBUNIT CLP1P | Superscaffold1 | 95274664 | 95285536 | + |
| CDS | |||||
| PE_Scaf10375_0.3 | |||||
| Transcript |
| PE_Scaf10375_0.3 |
| Protein |
| PE_Scaf10375_0.3 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF16573 | CLP1_N | N-terminal beta-sandwich domain of polyadenylation factor | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR032324 | Domain | Clp1, N-terminal beta-sandwich domain | Interproscan |
| IPR038239 | Homologous_superfamily | Clp1, N-terminal beta-sandwich domain superfamily | Interproscan |
| IPR045116 | Family | Polyribonucleotide 5-hydroxyl-kinase Clp1/Grc3 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12755 | CLEAVAGE/POLYADENYLATION FACTOR IA SUBUNIT CLP1P | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0006378 | Biological Process | obsolete mRNA polyadenylation | Interproscan |
| GO:0006388 | Biological Process | tRNA splicing, via endonucleolytic cleavage and ligation | Interproscan |
| GO:0006396 | Biological Process | RNA processing | Interproscan |
| GO:0051731 | Molecular Function | polynucleotide 5'-hydroxyl-kinase activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for PE_Scaf10375_0.3 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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