Detailed information of PE_Scaf10233_1.6 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf10233_1.6ACROSIN-RELATEDSuperscaffold34634423146397711+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00057Ldl_recept_aLow-density lipoprotein receptor domain class ARepeatInterproscan
PF00089TrypsinTrypsinDomainInterproscan
PF15494SRCR_2Scavenger receptor cysteine-rich domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001190DomainSRCR domainInterproscan
IPR001254DomainSerine proteases, trypsin domainInterproscan
IPR002172RepeatLow-density lipoprotein (LDL) receptor class A repeatInterproscan
IPR009003Homologous_superfamilyPeptidase S1, PA clanInterproscan
IPR017448DomainSRCR-like domainInterproscan
IPR018114Active_siteSerine proteases, trypsin family, histidine active siteInterproscan
IPR023415Conserved_siteLow-density lipoprotein (LDL) receptor class A, conserved siteInterproscan
IPR033116Active_siteSerine proteases, trypsin family, serine active siteInterproscan
IPR036055Homologous_superfamilyLDL receptor-like superfamilyInterproscan
IPR036772Homologous_superfamilySRCR-like domain superfamilyInterproscan
IPR043504Homologous_superfamilyPeptidase S1, PA clan, chymotrypsin-like foldInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR24252ACROSIN-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0004252Molecular Functionserine-type endopeptidase activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf10233_1.6 global RNA-seq network
TOP