| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| PE_Scaf10198_0.3 | SORTING NEXIN-4 | Superscaffold3 | 72801708 | 72815008 | + |
| CDS | |||||
| PE_Scaf10198_0.3 | |||||
| Transcript |
| PE_Scaf10198_0.3 |
| Protein |
| PE_Scaf10198_0.3 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF09325 | Vps5 | Vps5 C terminal like | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR015404 | Domain | Sorting nexin/Vps5-like, C-terminal | Interproscan |
| IPR027267 | Homologous_superfamily | AH/BAR domain superfamily | Interproscan |
| IPR034783 | Family | Sorting nexin-4 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46596 | SORTING NEXIN-4 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005886 | Cellular Component | plasma membrane | Interproscan |
| GO:0015031 | Biological Process | protein transport | Interproscan |
| GO:0031201 | Cellular Component | SNARE complex | Interproscan |
| GO:0031901 | Cellular Component | early endosome membrane | Interproscan |
| GO:0032266 | Molecular Function | phosphatidylinositol-3-phosphate binding | Interproscan |
| GO:2000786 | Biological Process | positive regulation of autophagosome assembly | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for PE_Scaf10198_0.3 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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