Detailed information of OS493_040549-T1 in Lophelia pertusa

Genomic Location: scaffold_2486:1695...4343
NR annotation: KAJ7381546.1, Rho guanine nucleotide exchange factor 26, partial [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5BKC9Ephexin-1 OS=Rattus norvegicus OX=10116 GN=Ngef PE=1 SV=2
Q8CHT1Ephexin-1 OS=Mus musculus OX=10090 GN=Ngef PE=1 SV=1
Q5RDX5Ephexin-1 OS=Pongo abelii OX=9601 GN=NGEF PE=2 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|SH3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00169PHPH domainDomainInterproscan
PF00018SH3_1SH3 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001849DomainPleckstrin homology domainInterproscan
IPR036028Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR001452DomainSH3 domainInterproscan
IPR047270DomainEphexin-like, PH domainInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR047271FamilyEphexin-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12845GUANINE NUCLEOTIDE EXCHANGE FACTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005085Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0090630Biological Processactivation of GTPase activityInterproscan

Expression pattern
 Expression trend for OS493_040549-T1 global co-expression network
TOP