Detailed information of OS493_040229-T1 in Lophelia pertusa

Genomic Location: scaffold_1907:3021...9855
NR annotation: KAJ7346451.1, DNA repair and recombination protein rad54b, partial [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9Y620DNA repair and recombination protein RAD54B OS=Homo sapiens OX=9606 GN=RAD54B PE=1 SV=1
Q6PFE3DNA repair and recombination protein RAD54B OS=Mus musculus OX=10090 GN=Rad54b PE=2 SV=1
Q9DG67DNA repair and recombination protein RAD54B OS=Gallus gallus OX=9031 GN=RAD54B PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR049730DomainSNF2/RAD5-like, C-terminal helicase domainInterproscan
IPR050496FamilySNF2/RAD54 Helicase and DNA RepairInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45629SNF2/RAD54 FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000724Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0007131Biological Processreciprocal meiotic recombinationInterproscan
GO:0015616Molecular FunctionDNA translocase activityInterproscan

Expression pattern
 Expression trend for OS493_040229-T1 global co-expression network
TOP