Detailed information of OS493_040170-T1 in Lophelia pertusa

Genomic Location: scaffold_1818:4881...8462
NR annotation: KAJ7310192.1, FACT complex subunit ssrp1 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9W602FACT complex subunit SSRP1 OS=Xenopus laevis OX=8355 GN=ssrp1 PE=1 SV=1
Q05783High mobility group protein D OS=Drosophila melanogaster OX=7227 GN=HmgD PE=1 SV=1
Q06943High mobility group protein Z OS=Drosophila melanogaster OX=7227 GN=HmgZ PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00505HMG_boxHMG (high mobility group) boxDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009071DomainHigh mobility group box domainInterproscan
IPR036910Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan
IPR044601Family3xHMG-box protein HMGB6/HMGB13Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46912HIGH MOBILITY GROUP B PROTEIN 13Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan

Expression pattern
 Expression trend for OS493_040170-T1 global co-expression network
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