Detailed information of OS493_040005-T1 in Lophelia pertusa

Genomic Location: scaffold_1638:5087...9163
NR annotation: KAJ7310879.1, smg-9, nonsense mediated mRNA decay factor, partial [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q2YDD2Nonsense-mediated mRNA decay factor SMG9 OS=Bos taurus OX=9913 GN=SMG9 PE=2 SV=1
Q9H0W8Nonsense-mediated mRNA decay factor SMG9 OS=Homo sapiens OX=9606 GN=SMG9 PE=1 SV=1
Q9DB90Nonsense-mediated mRNA decay factor SMG9 OS=Mus musculus OX=10090 GN=Smg9 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
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 InterPro
InterPro termTypeDescriptionSource
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR039177FamilyNonsense-mediated mRNA decay factor SMG9Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14270UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000184Biological Processnuclear-transcribed mRNA catabolic process, nonsense-mediated decayInterproscan

Expression pattern
 Expression trend for OS493_040005-T1 global co-expression network
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