Detailed information of OS493_039922-T1 in Lophelia pertusa

Genomic Location: scaffold_1549:10969...11289
NR annotation: KAJ7388088.1, hypothetical protein OS493_039922 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O08574Mesoderm posterior protein 2 OS=Mus musculus OX=10090 GN=Mesp2 PE=1 SV=1
P97309Mesoderm posterior protein 1 OS=Mus musculus OX=10090 GN=Mesp1 PE=2 SV=2
Q0VG99Mesoderm posterior protein 2 OS=Homo sapiens OX=9606 GN=MESP2 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00010HLHHelix-loop-helix DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR040259FamilyMesogenin/MesPInterproscan
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR20937IP14615PInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0001707Biological Processmesoderm formationInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan

Expression pattern
 Expression trend for OS493_039922-T1 global co-expression network
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