Detailed information of OS493_039840-T1 in Lophelia pertusa

Genomic Location: scaffold_1478:6825...8652
NR annotation: KAJ7381656.1, Serine hydroxymethyltransferase 2 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P34897Serine hydroxymethyltransferase, mitochondrial OS=Homo sapiens OX=9606 GN=SHMT2 PE=1 SV=3
Q3SZ20Serine hydroxymethyltransferase, mitochondrial OS=Bos taurus OX=9913 GN=SHMT2 PE=2 SV=1
P14519Serine hydroxymethyltransferase, mitochondrial OS=Oryctolagus cuniculus OX=9986 GN=SHMT2 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00464SHMTSerine hydroxymethyltransferaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015422Homologous_superfamilyPyridoxal phosphate-dependent transferase, small domainInterproscan
IPR039429DomainSerine hydroxymethyltransferase-like domainInterproscan
IPR049943FamilySerine hydroxymethyltransferase-likeInterproscan
IPR015424Homologous_superfamilyPyridoxal phosphate-dependent transferaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11680SERINE HYDROXYMETHYLTRANSFERASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004372Molecular Functionglycine hydroxymethyltransferase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006565Biological ProcessL-serine catabolic processInterproscan
GO:0006730Biological Processone-carbon metabolic processInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0019264Biological Processglycine biosynthetic process from serineInterproscan
GO:0030170Molecular Functionpyridoxal phosphate bindingInterproscan
GO:0046653Biological Processtetrahydrofolate metabolic processInterproscan
GO:0046655Biological Processfolic acid metabolic processInterproscan
GO:0050897Molecular Functioncobalt ion bindingInterproscan
GO:0070905Molecular Functionserine bindingInterproscan

Expression pattern
 Expression trend for OS493_039840-T1 global co-expression network
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