Detailed information of OS493_039817-T1 in Lophelia pertusa

Genomic Location: scaffold_1465:1810...5359
NR annotation: KAJ7388100.1, Nuclear pore complex protein Nup98-Nup96 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9VCH5Nuclear pore complex protein Nup98-Nup96 OS=Drosophila melanogaster OX=7227 GN=Nup98-96 PE=1 SV=3
P52948Nuclear pore complex protein Nup98-Nup96 OS=Homo sapiens OX=9606 GN=NUP98 PE=1 SV=4
Q6PFD9Nuclear pore complex protein Nup98-Nup96 OS=Mus musculus OX=10090 GN=Nup98 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04096Nucleoporin2Nucleoporin autopeptidaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR037665FamilyNucleoporin peptidase S59-likeInterproscan
IPR036903Homologous_superfamilyNuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domain superfamilyInterproscan
IPR007230DomainNuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23198NUCLEOPORINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000973Biological Processpost-transcriptional tethering of RNA polymerase II gene DNA at nuclear peripheryInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005643Cellular Componentnuclear poreInterproscan
GO:0006405Biological ProcessRNA export from nucleusInterproscan
GO:0006606Biological Processprotein import into nucleusInterproscan
GO:0008139Molecular Functionnuclear localization sequence bindingInterproscan
GO:0017056Molecular Functionstructural constituent of nuclear poreInterproscan
GO:0034398Biological Processtelomere tethering at nuclear peripheryInterproscan
GO:0044614Cellular Componentnuclear pore cytoplasmic filamentsInterproscan
GO:0006913Biological Processnucleocytoplasmic transportInterproscan

Expression pattern
 Expression trend for OS493_039817-T1 global co-expression network
TOP