Detailed information of OS493_039522-T1 in Lophelia pertusa

Genomic Location: scaffold_1227:6132...9113
NR annotation: KAJ7375695.1, suppressor of kinetochore protein mutant, partial [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
G5ECU1Skp1-related protein OS=Caenorhabditis elegans OX=6239 GN=skr-1 PE=1 SV=1
Q3ZCF3S-phase kinase-associated protein 1 OS=Bos taurus OX=9913 GN=SKP1 PE=1 SV=1
P63209S-phase kinase-associated protein 1 OS=Cavia porcellus OX=10141 GN=SKP1 PE=2 SV=2
 Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 adaptor Cullin RING|SKP1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01466Skp1Skp1 family, dimerisation domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016897FamilyS-phase kinase-associated protein 1Interproscan
IPR011333Homologous_superfamilySKP1/BTB/POZ domain superfamilyInterproscan
IPR016072DomainSKP1 component, dimerisationInterproscan
IPR036296Homologous_superfamilySKP1-like, dimerisation domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11165SKP1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0031146Biological ProcessSCF-dependent proteasomal ubiquitin-dependent protein catabolic processInterproscan
GO:0097602Molecular Functioncullin family protein bindingInterproscan

Expression pattern
 Expression trend for OS493_039522-T1 global co-expression network
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