Detailed information of OS493_039493-T1 in Lophelia pertusa

Genomic Location: scaffold_1201:8055...13604
NR annotation: KAJ7388161.1, F-box only protein 11 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q86XK2F-box only protein 11 OS=Homo sapiens OX=9606 GN=FBXO11 PE=1 SV=3
Q7TSL3F-box only protein 11 OS=Rattus norvegicus OX=10116 GN=Fbxo11 PE=2 SV=1
Q7TPD1F-box only protein 11 OS=Mus musculus OX=10090 GN=Fbxo11 PE=1 SV=3
 Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity|UBR-box

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13229Beta_helixRight handed beta helix regionRepeatInterproscan
PF02207zf-UBRPutative zinc finger in N-recognin (UBR box)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012334Homologous_superfamilyPectin lyase foldInterproscan
IPR047504DomainF-box only protein 11, UBR-boxInterproscan
IPR011050Homologous_superfamilyPectin lyase fold/virulence factorInterproscan
IPR003126DomainZinc finger, UBR-typeInterproscan
IPR022441RepeatParallel beta-helix repeat-2Interproscan
IPR006633DomainCarbohydrate-binding/sugar hydrolysis domainInterproscan
IPR051550FamilySCF Complex Subunits and Alginate EpimerasesInterproscan
IPR039448DomainRight handed beta helix domainInterproscan
IPR006626RepeatParallel beta-helix repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22990F-BOX ONLY PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0042981Biological Processregulation of apoptotic processInterproscan

Expression pattern
 Expression trend for OS493_039493-T1 global co-expression network
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