Detailed information of OS493_039312-T1 in Lophelia pertusa

Genomic Location: scaffold_1062:1921...10504
NR annotation: KAJ7314520.1, Bromodomain and WD repeat-containing protein 3 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A2AHJ4Bromodomain and WD repeat-containing protein 3 OS=Mus musculus OX=10090 GN=Brwd3 PE=1 SV=1
Q8VDD9PH-interacting protein OS=Mus musculus OX=10090 GN=Phip PE=1 SV=2
Q8WWQ0PH-interacting protein OS=Homo sapiens OX=9606 GN=PHIP PE=1 SV=2
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR052060FamilyBromodomain and WD repeat-containingInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16266WD REPEAT DOMAIN 9Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0007010Biological Processcytoskeleton organizationInterproscan
GO:0008360Biological Processregulation of cell shapeInterproscan

Expression pattern
 Expression trend for OS493_039312-T1 global co-expression network
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