Detailed information of OS493_039250-T1 in Lophelia pertusa

Genomic Location: scaffold_1017:3611...7550
NR annotation: KAJ7375731.1, hypothetical protein OS493_039250 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6FDF5Osmo-dependent choline transporter BetT2 OS=Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1) OX=62977 GN=betT2 PE=1 SV=1
Q6FDF6Osmo-independent choline transporter BetT1 OS=Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1) OX=62977 GN=betT1 PE=1 SV=1
G3XCN6Glycine betaine/proline betaine transporter BetS OS=Rhizobium meliloti OX=382 GN=betS PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02028BCCTBCCT, betaine/carnitine/choline family transporterFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000060FamilyBCCT transporter familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR30047HIGH-AFFINITY CHOLINE TRANSPORT PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0006810Biological ProcesstransportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016021Cellular ComponentmembraneInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0071705Biological Processnitrogen compound transportInterproscan

Expression pattern
 Expression trend for OS493_039250-T1 global co-expression network
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