Detailed information of OS493_039195-T1 in Lophelia pertusa

Genomic Location: scaffold_983:3224...11934
NR annotation: KAJ7348761.1, btaf1 RNA polymerase II [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O14981TATA-binding protein-associated factor 172 OS=Homo sapiens OX=9606 GN=BTAF1 PE=1 SV=2
O43065TATA-binding protein-associated factor mot1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mot1 PE=1 SV=4
P32333TATA-binding protein-associated factor MOT1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MOT1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF00176SNF2-rel_domSNF2-related domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR038718Homologous_superfamilySNF2-like, N-terminal domain superfamilyInterproscan
IPR049730DomainSNF2/RAD5-like, C-terminal helicase domainInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR000330DomainSNF2, N-terminalInterproscan
IPR044972FamilyTATA-binding protein-associated factor Mot1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR36498TATA-BINDING PROTEIN-ASSOCIATED FACTOR 172Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0140658Molecular FunctionATP-dependent chromatin remodeler activityInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0017025Molecular FunctionTBP-class protein bindingInterproscan

Expression pattern
 Expression trend for OS493_039195-T1 global co-expression network
TOP