Detailed information of OS493_038394-T1 in Lophelia pertusa

Genomic Location: scaffold_573:58128...67887
NR annotation: KAJ7375864.1, hypothetical protein OS493_038394, partial [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q1L721E3 ubiquitin-protein ligase RNF138 OS=Xenopus laevis OX=8355 GN=rnf138 PE=1 SV=1
Q8R0K2E3 ubiquitin-protein ligase TRIM31 OS=Mus musculus OX=10090 GN=Trim31 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05485THAPTHAP domainDomainInterproscan
PF13923zf-C3HC4_2Zinc finger, C3HC4 type (RING finger)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR006612DomainTHAP-type zinc fingerInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR051657FamilyRNF168/RNF169 E3 ubiquitin-protein ligaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23328UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006302Biological Processdouble-strand break repairInterproscan
GO:0031491Molecular Functionnucleosome bindingInterproscan
GO:0035861Cellular Componentsite of double-strand breakInterproscan

Expression pattern
 Expression trend for OS493_038394-T1 global co-expression network
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