Detailed information of OS493_037688-T1 in Lophelia pertusa

Genomic Location: scaffold_449:19787...22456
NR annotation: KAJ7350225.1, Homeobox protein Hox-A9 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P10179Homeobox protein HB4 (Fragment) OS=Tripneustes gratilla OX=7673 PE=3 SV=1
Q9PWD5Homeobox protein Hox-A9 OS=Morone saxatilis OX=34816 GN=hoxa9 PE=3 SV=1
P31247Homeobox protein Hox-B3 (Fragment) OS=Xenopus laevis OX=8355 GN=hoxb3 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001356DomainHomeobox domainInterproscan
IPR017970Conserved_siteHomeobox, conserved siteInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR020479DomainHomeobox domain, metazoaInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45664PROTEIN ZERKNUELLT 1-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0009952Biological Processanterior/posterior pattern specificationInterproscan
GO:0048704Biological Processembryonic skeletal system morphogenesisInterproscan

Expression pattern
 Expression trend for OS493_037688-T1 global co-expression network
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