Detailed information of OS493_037183-T1 in Lophelia pertusa

Genomic Location: scaffold_406:131811...132740
NR annotation: KAJ7369682.1, hepatocyte nuclear factor [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q91765Forkhead box protein A2-A OS=Xenopus laevis OX=8355 GN=foxa2-a PE=1 SV=1
Q7T1R4Forkhead box protein A2 OS=Xenopus tropicalis OX=8364 GN=foxa2 PE=2 SV=1
P84961Forkhead box protein A2-B OS=Xenopus laevis OX=8355 GN=foxa2-b PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00250ForkheadForkhead domainDomainInterproscan
PF09354HNF_CHNF3 C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001766DomainFork head domainInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR030456Conserved_siteFork head domain conserved site 2Interproscan
IPR050211FamilyForkhead box domain-containing proteinInterproscan
IPR018533DomainForkhead box protein, C-terminalInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR047388DomainProtein fork head-like, forkhead domainInterproscan
IPR018122Conserved_siteFork head domain conserved site1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11829FORKHEAD BOX PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0009653Biological Processanatomical structure morphogenesisInterproscan
GO:0030154Biological Processcell differentiationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K08035FOXA2, HNF3B; forkhead box protein A2, hepatocyte nuclear factor 3-beta-Transcription factorsko03000deepkoala

Expression pattern
 Expression trend for OS493_037183-T1 global co-expression network
TOP