Detailed information of OS493_036966-T1 in Lophelia pertusa

Genomic Location: scaffold_392:243733...251985
NR annotation: KAJ7382127.1, Transcriptional adapter 2-alpha [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8CHV6Transcriptional adapter 2-alpha OS=Mus musculus OX=10090 GN=Tada2a PE=1 SV=1
Q6AYE3Transcriptional adapter 2-alpha OS=Rattus norvegicus OX=10116 GN=Tada2a PE=2 SV=1
Q3SZP8Transcriptional adapter 2-alpha OS=Bos taurus OX=9913 GN=TADA2A PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04433SWIRMSWIRM domainDomainInterproscan
PF00249Myb_DNA-bindingMyb-like DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR017884DomainSANT domainInterproscan
IPR017930DomainMyb domainInterproscan
IPR001005DomainSANT/Myb domainInterproscan
IPR007526DomainSWIRM domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR016827FamilyTranscriptional adaptor 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12374TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003713Molecular Functiontranscription coactivator activityInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0003682Molecular Functionchromatin bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0070461Cellular ComponentSAGA-type complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11314TADA2A, ADA2; transcriptional adapter 2-alpha-Chromosome and associated proteinsko03036deepkoala

Expression pattern
 Expression trend for OS493_036966-T1 global co-expression network
TOP