Detailed information of OS493_036955-T1 in Lophelia pertusa

Genomic Location: scaffold_392:136964...152385
NR annotation: KAJ7382116.1, RING-type E3 ubiquitin-protein ligase ppil2 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9D787RING-type E3 ubiquitin-protein ligase PPIL2 OS=Mus musculus OX=10090 GN=Ppil2 PE=1 SV=2
Q13356RING-type E3 ubiquitin-protein ligase PPIL2 OS=Homo sapiens OX=9606 GN=PPIL2 PE=1 SV=1
P52012Peptidyl-prolyl cis-trans isomerase 4 OS=Caenorhabditis elegans OX=6239 GN=cyn-4 PE=1 SV=3
 Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|U-box

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00160Pro_isomeraseCyclophilin type peptidyl-prolyl cis-trans isomerase/CLDDomainInterproscan
PF04641Rtf2Rtf2 RING-fingerFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002130DomainCyclophilin-type peptidyl-prolyl cis-trans isomerase domainInterproscan
IPR020892Conserved_siteCyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved siteInterproscan
IPR026951DomainPeptidyl-prolyl cis-trans isomerase like 2, U-box domainInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR029000Homologous_superfamilyCyclophilin-like domain superfamilyInterproscan
IPR044666FamilyCyclophilin-type peptidyl-prolyl cis-trans isomerase, cyclophilin A-likeInterproscan
IPR003613DomainU-box domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45625PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000413Biological Processprotein peptidyl-prolyl isomerizationInterproscan
GO:0003755Molecular Functionpeptidyl-prolyl cis-trans isomerase activityInterproscan
GO:0006457Biological Processprotein foldingInterproscan
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0071013Cellular Componentcatalytic step 2 spliceosomeInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10598PPIL2, CYC4, CHP60; peptidyl-prolyl cis-trans isomerase-like 2EC:5.2.1.8
Ubiquitin systemko04121deepkoala

Expression pattern
 Expression trend for OS493_036955-T1 global co-expression network
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