Detailed information of OS493_036893-T1 in Lophelia pertusa Gene info
Gene IDAnnotationScaffoldStartEndStrand
OS493_036893-T1PR DOMAIN ZINC FINGER PROTEINscaffold_389113997119721+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Transcription Factors Familyzf-C2H2

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF000017tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan
PF00096zf-C2H2Zinc finger, C2H2 typeDomainInterproscan
PF13913zf-C2HC_2zinc-finger of a C2HC-typeDomainInterproscan
PF21549PRDM2_PRPR domain zinc finger protein 2, PR domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR001214DomainSET domainInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR046341Homologous_superfamilySET domain superfamilyInterproscan
IPR050331FamilyZinc fingerInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR16515PR DOMAIN ZINC FINGER PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000977Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0010468Biological Processregulation of gene expressionInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0034972Biological Processobsolete histone H3-R26 methylationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

Expression pattern
 1. Expression trend for OS493_036893-T1 global RNA-seq network
TOP