Detailed information of OS493_036843-T1 in Lophelia pertusa

Genomic Location: scaffold_386:103528...108714
NR annotation: KAJ7382134.1, E3 ubiquitin-protein ligase ubr4 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q2TL32E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2
A2AN08E3 ubiquitin-protein ligase UBR4 OS=Mus musculus OX=10090 GN=Ubr4 PE=1 SV=1
Q5T4S7E3 ubiquitin-protein ligase UBR4 OS=Homo sapiens OX=9606 GN=UBR4 PE=1 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity|UBR-box

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02207zf-UBRPutative zinc finger in N-recognin (UBR box)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003126DomainZinc finger, UBR-typeInterproscan
IPR047509DomainE3 ubiquitin-protein ligase UBR4-like, UBR-boxInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR045189FamilyE3 ubiquitin ligase UBR4-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21725E3 UBIQUITIN-PROTEIN LIGASE UBR4Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

Expression pattern
 Expression trend for OS493_036843-T1 global co-expression network
TOP