Detailed information of OS493_036732-T1 in Lophelia pertusa

Genomic Location: scaffold_381:92513...101625
NR annotation: KAJ7376128.1, Transducin beta-like protein 2 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9Y4P3Transducin beta-like protein 2 OS=Homo sapiens OX=9606 GN=TBL2 PE=1 SV=1
Q9R099Transducin beta-like protein 2 OS=Mus musculus OX=10090 GN=Tbl2 PE=1 SV=2
Q9FNN2WD repeat-containing protein 26 homolog OS=Arabidopsis thaliana OX=3702 GN=WDR26 PE=1 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR020472RepeatG-protein beta WD-40 repeatInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR042410FamilyTransducin beta-like protein 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44321TRANSDUCIN BETA-LIKE PROTEIN 2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0030968Biological Processendoplasmic reticulum unfolded protein responseInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K23325TBL2; transducin beta-like protein 2-Translation factorsko03012deepkoala

Expression pattern
 Expression trend for OS493_036732-T1 global co-expression network
TOP