Gene detail

Detailed information of OS493_036709-T1 in Lophelia pertusa

Genomic Location: scaffold_380:185157...197699
NR annotation: KAJ7382158.1, hypothetical protein OS493_036709 [Desmophyllum pertusum]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
A7TS67	Decapping nuclease RAI1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17) OX=436907 GN=RAI1 PE=3 SV=1
Q6CNF8	Decapping nuclease RAI1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=RAI1 PE=3 SV=3
Q6FWY5	Decapping nuclease RAI1 OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=RAI1 PE=3 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08652	RAI1	RAI1 like PD-(D/E)XK nuclease	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR039039	Family	RAI1-like family	Interproscan
IPR013961	Domain	RAI1-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12395	DOM-3 RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000956	Biological Process	nuclear-transcribed mRNA catabolic process	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0034353	Molecular Function	mRNA 5'-diphosphatase activity	Interproscan
GO:0090305	Biological Process	obsolete nucleic acid phosphodiester bond hydrolysis	Interproscan
GO:0110155	Biological Process	NAD-cap decapping	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14845	RAI1, DOM3Z; RAT1-interacting protein	-	Ribosome biogenesis	ko03009	deepkoala

Expression pattern