Detailed information of OS493_036638-T1 in Lophelia pertusa Gene info
Gene IDAnnotationScaffoldStartEndStrand
OS493_036638-T1DNA2/NAM7 HELICASE FAMILYscaffold_3763148571448-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06839zf-GRFGRF zinc fingerDomainInterproscan
PF10382DUF2439Protein of unknown function (DUF2439)FamilyInterproscan
PF13086AAA_11AAA domainDomainInterproscan
PF13087AAA_12AAA domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR010666DomainZinc finger, GRF-typeInterproscan
IPR018838Domain5'-3' DNA helicase ZGRF1-like, N-terminal domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR041677DomainDNA2/NAM7 helicase, helicase domainInterproscan
IPR041679DomainDNA2/NAM7 helicase-like, C-terminalInterproscan
IPR045055FamilyDNA2/NAM7-like helicaseInterproscan
IPR047187DomainUpf1-like, C-terminal helicase domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR10887DNA2/NAM7 HELICASE FAMILYInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000184Biological Processnuclear-transcribed mRNA catabolic process, nonsense-mediated decayInterproscan
GO:0003724Molecular FunctionRNA helicase activityInterproscan
GO:0004386Molecular Functionhelicase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for OS493_036638-T1 global RNA-seq network
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