Detailed information of OS493_036520-T1 in Lophelia pertusa Gene info
Gene IDAnnotationScaffoldStartEndStrand
OS493_036520-T1F-BOX ONLY PROTEINscaffold_367288406293512+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13229Beta_helixRight handed beta helix regionRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR006626RepeatParallel beta-helix repeatInterproscan
IPR011050Homologous_superfamilyPectin lyase fold/virulence factorInterproscan
IPR012334Homologous_superfamilyPectin lyase foldInterproscan
IPR039448DomainRight handed beta helix domainInterproscan
IPR051550FamilySCF Complex Subunits and Alginate EpimerasesInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR22990F-BOX ONLY PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0042981Biological Processregulation of apoptotic processInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for OS493_036520-T1 global RNA-seq network
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