Detailed information of OS493_036517-T1 in Lophelia pertusa

Genomic Location: scaffold_367:233302...238967
NR annotation: KAJ7388663.1, protein transport [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5XI41Translocating chain-associated membrane protein 1 OS=Rattus norvegicus OX=10116 GN=Tram1 PE=1 SV=3
Q9GKZ4Translocating chain-associated membrane protein 1 OS=Bos taurus OX=9913 GN=TRAM1 PE=2 SV=3
Q5R7Z3Translocating chain-associated membrane protein 1 OS=Pongo abelii OX=9601 GN=TRAM1 PE=2 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03798TRAM_LAG1_CLN8TLC domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016439FamilySphingosine N-acyltransferase Lag1/Lac1-likeInterproscan
IPR016447FamilyTranslocation associated membrane proteinInterproscan
IPR006634DomainTRAM/LAG1/CLN8 homology domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12371TRANSLOCATION ASSOCIATED MEMBRANE PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046513Biological Processceramide biosynthetic processInterproscan
GO:0050291Molecular Functionsphingosine N-acyltransferase activityInterproscan
GO:0006616Biological ProcessSRP-dependent cotranslational protein targeting to membrane, translocationInterproscan
GO:0030176Cellular Componentobsolete integral component of endoplasmic reticulum membraneInterproscan
GO:0045048Biological Processprotein insertion into ER membraneInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14010TRAM1; translocating chain-associated membrane protein 1-Protein processing in endoplasmic reticulumko04141deepkoala

Expression pattern
 Expression trend for OS493_036517-T1 global co-expression network
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