Detailed information of OS493_036442-T1 in Lophelia pertusa

Genomic Location: scaffold_364:287751...305557
NR annotation: KAJ7369799.1, hypothetical protein OS493_036442 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q96JG6Syndetin OS=Homo sapiens OX=9606 GN=VPS50 PE=1 SV=3
Q8CI71Syndetin OS=Mus musculus OX=10090 GN=Vps50 PE=1 SV=2
F1LSG8Syndetin OS=Rattus norvegicus OX=10116 GN=Vps50 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10475Vps54_NVacuolar-sorting protein 54, of GARP complex RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR040047FamilySyndetinInterproscan
IPR019515DomainVacuolar protein sorting-associated protein 54, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13258UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000149Molecular FunctionSNARE bindingInterproscan
GO:0032456Biological Processendocytic recyclingInterproscan
GO:0042147Biological Processretrograde transport, endosome to GolgiInterproscan
GO:1990745Cellular ComponentEARP complexInterproscan

Expression pattern
 Expression trend for OS493_036442-T1 global co-expression network
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