Detailed information of OS493_036358-T1 in Lophelia pertusa

Genomic Location: scaffold_359:297294...302724
NR annotation: KAJ7351155.1, Paraplegin [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q3ULF4Mitochondrial inner membrane m-AAA protease component paraplegin OS=Mus musculus OX=10090 GN=Spg7 PE=1 SV=1
Q7TT47Mitochondrial inner membrane m-AAA protease component paraplegin OS=Rattus norvegicus OX=10116 GN=Spg7 PE=2 SV=2
Q9UQ90Mitochondrial inner membrane m-AAA protease component paraplegin OS=Homo sapiens OX=9606 GN=SPG7 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00004AAAATPase family associated with various cellular activities (AAA)DomainInterproscan
PF17862AAA_lid_3AAA+ lid domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003959DomainATPase, AAA-type, coreInterproscan
IPR041569DomainAAA ATPase, AAA+ lid domainInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR050928FamilyATP-dependent Zinc MetalloproteaseInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43655ATP-DEPENDENT PROTEASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0005745Cellular Componentm-AAA complexInterproscan
GO:0034982Biological Processmitochondrial protein processingInterproscan

Expression pattern
 Expression trend for OS493_036358-T1 global co-expression network
TOP