Detailed information of OS493_036018-T1 in Lophelia pertusa

Genomic Location: scaffold_344:197170...203430
NR annotation: KAJ7382287.1, TOM1-like protein 2 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6ZVM7TOM1-like protein 2 OS=Homo sapiens OX=9606 GN=TOM1L2 PE=1 SV=1
Q5SRX1TOM1-like protein 2 OS=Mus musculus OX=10090 GN=Tom1l2 PE=1 SV=1
O88746Target of Myb1 membrane trafficking protein OS=Mus musculus OX=10090 GN=Tom1 PE=1 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Alpha-Helix|GAT
Ubiquitin FamilyUBD|Alpha-Helix|VHS

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03127GATGAT domainDomainInterproscan
PF00790VHSVHS domainRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002014DomainVHS domainInterproscan
IPR008942Homologous_superfamilyENTH/VHSInterproscan
IPR004152DomainGAT domainInterproscan
IPR038425Homologous_superfamilyGAT domain superfamilyInterproscan
IPR014645FamilyTarget of Myb protein 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13856VHS DOMAIN CONTAINING PROTEIN FAMILYInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0035091Molecular Functionphosphatidylinositol bindingInterproscan
GO:0043130Molecular Functionubiquitin bindingInterproscan
GO:0005768Cellular ComponentendosomeInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0030276Molecular Functionclathrin bindingInterproscan

Expression pattern
 Expression trend for OS493_036018-T1 global co-expression network
TOP