Detailed information of OS493_036003-T1 in Lophelia pertusa

Genomic Location: scaffold_343:214411...225057
NR annotation: KAJ7388725.1, Notchless protein 1 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7ZXK9Notchless protein homolog 1 OS=Xenopus laevis OX=8355 GN=nle1 PE=2 SV=1
Q58D20Notchless protein homolog 1 OS=Bos taurus OX=9913 GN=NLE1 PE=2 SV=3
Q8VEJ4Notchless protein homolog 1 OS=Mus musculus OX=10090 GN=Nle1 PE=1 SV=4
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08154NLENLE (NUC135) domainDomainInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012972DomainNLEInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19848WD40 REPEAT PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000027Biological Processribosomal large subunit assemblyInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0007219Biological ProcessNotch signaling pathwayInterproscan

Expression pattern
 Expression trend for OS493_036003-T1 global co-expression network
TOP