Detailed information of OS493_035998-T1 in Lophelia pertusa

Genomic Location: scaffold_343:103090...125507
NR annotation: KAJ7388720.1, hypothetical protein OS493_035998 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7Z569BRCA1-associated protein OS=Homo sapiens OX=9606 GN=BRAP PE=1 SV=2
Q99MP8BRCA1-associated protein OS=Mus musculus OX=10090 GN=Brap PE=1 SV=1
Q95QN6BRCA1-associated protein homolog 2 OS=Caenorhabditis elegans OX=6239 GN=brap-2 PE=3 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING
Ubiquitin FamilyUBD|ZnF|ZnF_UBP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13639zf-RING_2Ring finger domainDomainInterproscan
PF02148zf-UBPZn-finger in ubiquitin-hydrolases and other proteinDomainInterproscan
PF07576BRAP2BRCA1-associated protein 2FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR047243DomainBRCA1-associated protein, RING finger, H2 subclassInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR001607DomainZinc finger, UBP-typeInterproscan
IPR011422DomainBRCA1-associated 2/ETP1, RRMInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR034932DomainBRAP2, RNA recognition motifInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24007BRCA1-ASSOCIATED PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0007265Biological ProcessRas protein signal transductionInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10632BRAP; BRCA1-associated proteinEC:2.3.2.27
Ubiquitin systemko04121deepkoala

Expression pattern
 Expression trend for OS493_035998-T1 global co-expression network
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