Detailed information of OS493_035501-T1 in Lophelia pertusa

Genomic Location: scaffold_322:351999...361103
NR annotation: KAJ7369928.1, Tetratricopeptide repeat protein 37 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6DFB8Tetratricopeptide repeat protein 37 OS=Xenopus laevis OX=8355 GN=ttc37 PE=2 SV=1
O94474Superkiller protein 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ski3 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13181TPR_8Tetratricopeptide repeatRepeatInterproscan
PF13432TPR_16Tetratricopeptide repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR039226FamilySki3/TTC37Interproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15704SUPERKILLER 3 PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006401Biological ProcessRNA catabolic processInterproscan
GO:0034427Biological Processobsolete nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'Interproscan
GO:0055087Cellular ComponentSki complexInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

Expression pattern
 Expression trend for OS493_035501-T1 global co-expression network
TOP