Detailed information of OS493_035206-T1 in Lophelia pertusa

Genomic Location: scaffold_313:202180...204460
NR annotation: KAJ7388866.1, hypothetical protein OS493_035206 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A1YEV8Retina and anterior neural fold homeobox protein 2 OS=Gorilla gorilla gorilla OX=9595 GN=RAX2 PE=3 SV=1
Q96IS3Retina and anterior neural fold homeobox protein 2 OS=Homo sapiens OX=9606 GN=RAX2 PE=1 SV=1
A1YG25Retina and anterior neural fold homeobox protein 2 OS=Pan paniscus OX=9597 GN=RAX2 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001356DomainHomeobox domainInterproscan
IPR017970Conserved_siteHomeobox, conserved siteInterproscan
IPR000047Conserved_siteHelix-turn-helix motifInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR050649FamilyPaired Homeobox Transcription FactorsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24329HOMEOBOX PROTEIN ARISTALESSInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000977Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan

Expression pattern
 Expression trend for OS493_035206-T1 global co-expression network
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