| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| OS493_035061-T1 | WD40 REPEAT PROTEIN | scaffold_307 | 389421 | 390779 | - |
| CDS | |||||
| OS493_035061-T1 | |||||
| Transcript |
| OS493_035061-T1 |
| Protein |
| OS493_035061-T1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | UBD|Other|Beta-prp |
| Ubiquitin Family | E3|E3 adaptor Cullin RING|CDC20 |
| Ubiquitin Family | E3|E3 adaptor Cullin RING|SOCS |
| Ubiquitin Family | E3|E3 adaptor Cullin RING|DWD |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00400 | WD40 | WD domain, G-beta repeat | Repeat | Interproscan |
| PF07525 | SOCS_box | SOCS box | Domain | Interproscan |
| PF07676 | PD40 | WD40-like Beta Propeller Repeat | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001496 | Domain | SOCS box domain | Interproscan |
| IPR001680 | Repeat | WD40 repeat | Interproscan |
| IPR011659 | Repeat | WD40-like beta propeller | Interproscan |
| IPR015943 | Homologous_superfamily | WD40/YVTN repeat-like-containing domain superfamily | Interproscan |
| IPR036036 | Homologous_superfamily | SOCS box-like domain superfamily | Interproscan |
| IPR051983 | Family | WD repeat and SOCS box domain-containing protein | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR15622 | WD40 REPEAT PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000209 | Biological Process | protein polyubiquitination | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0035556 | Biological Process | intracellular signal transduction | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for OS493_035061-T1 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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