Detailed information of OS493_035034-T1 in Lophelia pertusa

Genomic Location: scaffold_307:116386...132781
NR annotation: KAJ7388888.1, Leucine-rich repeat-containing protein 40 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5RFE9Leucine-rich repeat-containing protein 40 OS=Pongo abelii OX=9601 GN=LRRC40 PE=2 SV=1
Q9CRC8Leucine-rich repeat-containing protein 40 OS=Mus musculus OX=10090 GN=Lrrc40 PE=1 SV=2
Q5ZLN0Leucine-rich repeat-containing protein 40 OS=Gallus gallus OX=9031 GN=LRRC40 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13855LRR_8Leucine rich repeatRepeatInterproscan
PF12799LRR_4Leucine Rich repeats (2 copies)RepeatInterproscan
PF00560LRR_1Leucine Rich RepeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR003591RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR050216FamilyLeucine-rich repeat domain-containing proteinInterproscan
IPR025875RepeatLeucine rich repeat 4Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48051-Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan

Expression pattern
 Expression trend for OS493_035034-T1 global co-expression network
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