Detailed information of OS493_034959-T1 in Lophelia pertusa

Genomic Location: scaffold_305:179772...185771
NR annotation: KAJ7351863.1, Beta-lactamase-like protein 2 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q0V9A9Endoribonuclease LACTB2 OS=Xenopus tropicalis OX=8364 GN=lactb2 PE=2 SV=1
Q6NYF0Endoribonuclease LACTB2 OS=Danio rerio OX=7955 GN=lactb2 PE=2 SV=1
Q5XGR8Endoribonuclease LACTB2 OS=Xenopus laevis OX=8355 GN=lactb2 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17778BLACT_WHBeta-lactamase associated winged helix domainDomainInterproscan
PF00753Lactamase_BMetallo-beta-lactamase superfamilyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001279DomainMetallo-beta-lactamaseInterproscan
IPR036866Homologous_superfamilyRibonuclease Z/Hydroxyacylglutathione hydrolase-likeInterproscan
IPR050662FamilySecondary metabolite biosynthesis-associated thioesteraseInterproscan
IPR041516DomainLACTB2, winged helix domainInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23131ENDORIBONUCLEASE LACTB2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003727Molecular Functionsingle-stranded RNA bindingInterproscan
GO:0004521Molecular FunctionRNA endonuclease activityInterproscan
GO:0005759Cellular Componentmitochondrial matrixInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K16639LACTB2; endoribonuclease LACTB2EC:3.1.27.-
Mitochondrial biogenesisko03029deepkoala

Expression pattern
 Expression trend for OS493_034959-T1 global co-expression network
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