| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| OS493_034909-T1 | RYBP AND YAF2-RELATED | scaffold_303 | 253055 | 257482 | + |
| CDS | |||||
| OS493_034909-T1 | |||||
| Transcript |
| OS493_034909-T1 |
| Protein |
| OS493_034909-T1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | UBD|ZnF|NZF |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00641 | zf-RanBP | Zn-finger in Ran binding protein and others | Domain | Interproscan |
| PF17219 | YAF2_RYBP | Yaf2/RYBP C-terminal binding motif | Motif | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001876 | Domain | Zinc finger, RanBP2-type | Interproscan |
| IPR033774 | Conserved_site | Yaf2/RYBP C-terminal binding motif | Interproscan |
| IPR036443 | Homologous_superfamily | Zinc finger, RanBP2-type superfamily | Interproscan |
| IPR039958 | Family | RING1 and YY1-binding protein/YY1-associated factor 2 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12920 | RYBP AND YAF2-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0003712 | Molecular Function | transcription coregulator activity | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0006355 | Biological Process | regulation of DNA-templated transcription | Interproscan |
| GO:0045893 | Biological Process | positive regulation of DNA-templated transcription | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for OS493_034909-T1 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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