Detailed information of OS493_034909-T1 in Lophelia pertusa

Genomic Location: scaffold_303:253055...257482
NR annotation: KAJ7376387.1, YY1-associated factor 2 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q99LW6YY1-associated factor 2 OS=Mus musculus OX=10090 GN=Yaf2 PE=1 SV=1
Q8IY57YY1-associated factor 2 OS=Homo sapiens OX=9606 GN=YAF2 PE=1 SV=3
Q8CCI5RING1 and YY1-binding protein OS=Mus musculus OX=10090 GN=Rybp PE=1 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|ZnF|NZF

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00641zf-RanBPZn-finger in Ran binding protein and othersDomainInterproscan
PF17219YAF2_RYBPYaf2/RYBP C-terminal binding motifMotifInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001876DomainZinc finger, RanBP2-typeInterproscan
IPR036443Homologous_superfamilyZinc finger, RanBP2-type superfamilyInterproscan
IPR039958FamilyRING1 and YY1-binding protein/YY1-associated factor 2Interproscan
IPR033774Conserved_siteYaf2/RYBP C-terminal binding motifInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12920RYBP AND YAF2-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003712Molecular Functiontranscription coregulator activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0045893Biological Processpositive regulation of DNA-templated transcriptionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11468YAF2; YY1-associated factor 2-Chromosome and associated proteinsko03036deepkoala

Expression pattern
 Expression trend for OS493_034909-T1 global co-expression network
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