| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| OS493_034896-T1 | ZINC FINGER PROTEIN 183 | scaffold_303 | 100837 | 103647 | + |
| CDS | |||||
| OS493_034896-T1 | |||||
| Transcript |
| OS493_034896-T1 |
| Protein |
| OS493_034896-T1 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | zf-CCCH |
| Ubiquitin Family | E3|E3 activity RING|RING |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00642 | zf-CCCH | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | Family | Interproscan |
| PF13923 | zf-C3HC4_2 | Zinc finger, C3HC4 type (RING finger) | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000571 | Domain | Zinc finger, CCCH-type | Interproscan |
| IPR001841 | Domain | Zinc finger, RING-type | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR017907 | Conserved_site | Zinc finger, RING-type, conserved site | Interproscan |
| IPR036855 | Homologous_superfamily | Zinc finger, CCCH-type superfamily | Interproscan |
| IPR039971 | Family | Pre-mRNA-splicing factor CWC24-like | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12930 | ZINC FINGER PROTEIN 183 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005684 | Cellular Component | U2-type spliceosomal complex | Interproscan |
| GO:0034247 | Biological Process | snoRNA splicing | Interproscan |
| GO:0046872 | Molecular Function | metal ion binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for OS493_034896-T1 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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