Detailed information of OS493_034886-T1 in Lophelia pertusa

Genomic Location: scaffold_302:296102...298415
NR annotation: KAJ7382449.1, hypothetical protein OS493_034886 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
H2LRU7Polycystin-2 OS=Oryzias latipes OX=8090 GN=pkd2 PE=1 SV=2
Q6IVV8Polycystin-2 OS=Danio rerio OX=7955 GN=pkd2 PE=1 SV=1
A2A259Polycystin-2-like protein 1 OS=Mus musculus OX=10090 GN=Pkd2l1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08016PKD_channelPolycystin cation channelFamilyInterproscan
PF20519Polycystin_domPolycystin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013122DomainPolycystin cation channel, PKD1/PKD2Interproscan
IPR051223FamilyPolycystinInterproscan
IPR046791DomainPolycystin domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10877POLYCYSTIN FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005262Molecular Functioncalcium channel activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0050982Biological Processdetection of mechanical stimulusInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K19478MAGT1, TUSC3; dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit MAGT1/TUSC3-Transportersko02000deepkoala

Expression pattern
 Expression trend for OS493_034886-T1 global co-expression network
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