Detailed information of OS493_034851-T1 in Lophelia pertusa

Genomic Location: scaffold_301:144282...153039
NR annotation: KAJ7388925.1, hypothetical protein OS493_034851 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P84589Ubiquitin (Fragment) OS=Lumbricus terrestris OX=6398 PE=1 SV=2
Q865C5Ubiquitin OS=Camelus dromedarius OX=9838 PE=3 SV=2
P68197Ubiquitin OS=Ceratitis capitata OX=7213 PE=1 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyULD|UBL|NEDD8
Ubiquitin FamilyULD|UFD/UBQ|UBQ_Other
Ubiquitin FamilyULD|UFD/UBQ|UBQ_PIM

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20694TRADD-like_NTRADD-like N-terminal domainDomainInterproscan
PF00240ubiquitinUbiquitin familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000626DomainUbiquitin-like domainInterproscan
IPR049341DomainTRADD-like N-terminal domainInterproscan
IPR050158FamilyUbiquitin and ubiquitin-likeInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR019956DomainUbiquitin domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10666UBIQUITINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0019941Biological Processmodification-dependent protein catabolic processInterproscan
GO:0031386Molecular Functionprotein tag activityInterproscan
GO:0031625Molecular Functionubiquitin protein ligase bindingInterproscan

Expression pattern
 Expression trend for OS493_034851-T1 global co-expression network
TOP