| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| OS493_034851-T1 | UBIQUITIN | scaffold_301 | 144282 | 153039 | + |
| CDS | |||||
| OS493_034851-T1 | |||||
| Transcript |
| OS493_034851-T1 |
| Protein |
| OS493_034851-T1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | ULD|UBL|NEDD8 |
| Ubiquitin Family | ULD|UFD/UBQ|UBQ_Other |
| Ubiquitin Family | ULD|UFD/UBQ|UBQ_PIM |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00240 | ubiquitin | Ubiquitin family | Domain | Interproscan |
| PF20694 | TRADD-like_N | TRADD-like N-terminal domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000626 | Domain | Ubiquitin-like domain | Interproscan |
| IPR019956 | Domain | Ubiquitin domain | Interproscan |
| IPR029071 | Homologous_superfamily | Ubiquitin-like domain superfamily | Interproscan |
| IPR049341 | Domain | TRADD-like N-terminal domain | Interproscan |
| IPR050158 | Family | Ubiquitin and ubiquitin-like | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10666 | UBIQUITIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0016567 | Biological Process | protein ubiquitination | Interproscan |
| GO:0019941 | Biological Process | modification-dependent protein catabolic process | Interproscan |
| GO:0031386 | Molecular Function | protein tag activity | Interproscan |
| GO:0031625 | Molecular Function | ubiquitin protein ligase binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for OS493_034851-T1 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.
