Detailed information of OS493_034772-T1 in Lophelia pertusa

Genomic Location: scaffold_299:44207...54805
NR annotation: KAJ7351868.1, E3 ubiquitin-protein ligase arih2 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9Z1K6E3 ubiquitin-protein ligase ARIH2 OS=Mus musculus OX=10090 GN=Arih2 PE=1 SV=1
O76924Potential E3 ubiquitin-protein ligase ariadne-2 OS=Drosophila melanogaster OX=7227 GN=ari-2 PE=1 SV=1
O95376E3 ubiquitin-protein ligase ARIH2 OS=Homo sapiens OX=9606 GN=ARIH2 PE=1 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity|RBR

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF19422AriadneAriadne domainDomainInterproscan
PF01485IBRIBR domain, a half RING-finger domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001841DomainZinc finger, RING-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR044066DomainTRIAD supradomainInterproscan
IPR045840DomainAriadne domainInterproscan
IPR047556DomainE3 ubiquitin-protein ligase TRIAD1, Rcat domainInterproscan
IPR002867DomainIBR domainInterproscan
IPR031127FamilyE3 ubiquitin ligase RBR familyInterproscan
IPR047555DomainE3 ubiquitin-protein ligase ARIH2, BRcat domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11685RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAININGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0000151Cellular Componentubiquitin ligase complexInterproscan
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0031624Molecular Functionubiquitin conjugating enzyme bindingInterproscan
GO:0032436Biological Processpositive regulation of proteasomal ubiquitin-dependent protein catabolic processInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11969ARIH2; ariadne-2EC:2.3.2.31
Ubiquitin systemko04121deepkoala

Expression pattern
 Expression trend for OS493_034772-T1 global co-expression network
TOP