Detailed information of OS493_034606-T1 in Lophelia pertusa

Genomic Location: scaffold_295:337051...363822
NR annotation: KAJ7388968.1, E3 ubiquitin-protein ligase nedd4 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q96PU5E3 ubiquitin-protein ligase NEDD4-like OS=Homo sapiens OX=9606 GN=NEDD4L PE=1 SV=2
Q5RBF2E3 ubiquitin-protein ligase NEDD4-like OS=Pongo abelii OX=9601 GN=NEDD4L PE=2 SV=1
Q8CFI0E3 ubiquitin-protein ligase NEDD4-like OS=Mus musculus OX=10090 GN=Nedd4l PE=1 SV=2
 Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity|HECT

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00168C2C2 domainDomainInterproscan
PF00632HECTHECT-domain (ubiquitin-transferase)DomainInterproscan
PF00397WWWW domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035892Homologous_superfamilyC2 domain superfamilyInterproscan
IPR001202DomainWW domainInterproscan
IPR036020Homologous_superfamilyWW domain superfamilyInterproscan
IPR000569DomainHECT domainInterproscan
IPR000008DomainC2 domainInterproscan
IPR035983Homologous_superfamilyHECT, E3 ligase catalytic domainInterproscan
IPR050409FamilyE3 ubiquitin-protein ligaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11254HECT DOMAIN UBIQUITIN-PROTEIN LIGASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0048814Biological Processregulation of dendrite morphogenesisInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:2000650Biological Processnegative regulation of sodium ion transmembrane transporter activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10591NEDD4, RSP5; E3 ubiquitin-protein ligase NEDD4EC:2.3.2.26
Mitochondrial biogenesisko03029deepkoala

Expression pattern
 Expression trend for OS493_034606-T1 global co-expression network
TOP