Detailed information of OS493_034505-T1 in Lophelia pertusa

Genomic Location: scaffold_293:35763...43949
NR annotation: KAJ7351901.1, hypothetical protein OS493_034505 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6XHA5Probable serine/threonine-protein kinase roco11 OS=Dictyostelium discoideum OX=44689 GN=roco11 PE=3 SV=1
P29687Ras-related protein Rab5 OS=Nicotiana tabacum OX=4097 GN=RAB5 PE=2 SV=1
P31583Ras-related protein RHN1 OS=Nicotiana plumbaginifolia OX=4092 GN=RHN1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08477RocRas of Complex, Roc, domain of DAPkinaseDomainInterproscan
PF16095CORC-terminal of Roc, COR, domainFamilyInterproscan
PF00531DeathDeath domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000488DomainDeath domainInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR011029Homologous_superfamilyDeath-like domain superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR050216FamilyLeucine-rich repeat domain-containing proteinInterproscan
IPR003591RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR025662Binding_siteSigma-54 interaction domain, ATP-binding site 1Interproscan
IPR032171DomainC-terminal of Roc (COR) domainInterproscan
IPR020859DomainRoc domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48051-Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0007165Biological Processsignal transductionInterproscan

Expression pattern
 Expression trend for OS493_034505-T1 global co-expression network
TOP