Detailed information of OS493_034347-T1 in Lophelia pertusa

Genomic Location: scaffold_288:207163...222330
NR annotation: KAJ7321728.1, REST corepressor 3 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5ZJ40REST corepressor 3 OS=Gallus gallus OX=9031 GN=RCOR3 PE=2 SV=1
Q9P2K3REST corepressor 3 OS=Homo sapiens OX=9606 GN=RCOR3 PE=1 SV=2
Q90WN5REST corepressor 1 OS=Xenopus laevis OX=8355 GN=rcor1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01448ELM2ELM2 domainFamilyInterproscan
PF00249Myb_DNA-bindingMyb-like DNA-binding domainDomainInterproscan
PF20878REST_helicalHelical region in REST corepressorFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001005DomainSANT/Myb domainInterproscan
IPR000949DomainELM2 domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR051066FamilyTranscriptional Regulator and CorepressorInterproscan
IPR017884DomainSANT domainInterproscan
IPR049048DomainREST corepressor, helical domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16089REST COREPRESSOR COREST PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000118Cellular Componenthistone deacetylase complexInterproscan
GO:0003714Molecular Functiontranscription corepressor activityInterproscan
GO:0005667Cellular Componenttranscription regulator complexInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0045892Biological Processnegative regulation of DNA-templated transcriptionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K26242RCOR2_3; REST corepressor 2/3-Chromosome and associated proteinsko03036deepkoala

Expression pattern
 Expression trend for OS493_034347-T1 global co-expression network
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