Detailed information of OS493_034315-T1 in Lophelia pertusa Gene info
Gene IDAnnotationScaffoldStartEndStrand
OS493_034315-T1CONTACTIN 5scaffold_286457461458698+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01391CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan
PF13927Ig_3Immunoglobulin domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR008160RepeatCollagen triple helix repeatInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR050958FamilyCell Adhesion and Cytoskeletal OrganizationInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR45080CONTACTIN 5Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0008046Molecular Functionaxon guidance receptor activityInterproscan
GO:0030424Cellular ComponentaxonInterproscan
GO:0043025Cellular Componentneuronal cell bodyInterproscan
GO:0050808Biological Processsynapse organizationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for OS493_034315-T1 global RNA-seq network
TOP