Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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Genomic Location: scaffold_285:55263...56588
NR annotation: KAJ7376489.1, hypothetical protein OS493_034225 [Desmophyllum pertusum]
| CDS | |
| OS493_034225-T1 | |
| Transcript |
| OS493_034225-T1 |
| Protein |
| OS493_034225-T1 |
| Uniprot term | Description |
|---|---|
| Q9Z2I4 | Roundabout homolog 3 OS=Mus musculus OX=10090 GN=Robo3 PE=1 SV=3 |
| Q90610 | Neogenin (Fragment) OS=Gallus gallus OX=9031 PE=2 SV=1 |
| Q96RW7 | Hemicentin-1 OS=Homo sapiens OX=9606 GN=HMCN1 PE=1 SV=2 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01391 | Collagen | Collagen triple helix repeat (20 copies) | Repeat | Interproscan |
| PF07679 | I-set | Immunoglobulin I-set domain | Domain | Interproscan |
| PF13927 | Ig_3 | Immunoglobulin domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR008160 | Repeat | Collagen triple helix repeat | Interproscan |
| IPR007110 | Domain | Immunoglobulin-like domain | Interproscan |
| IPR002181 | Domain | Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain | Interproscan |
| IPR036056 | Homologous_superfamily | Fibrinogen-like, C-terminal | Interproscan |
| IPR013783 | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR013098 | Domain | Immunoglobulin I-set | Interproscan |
| IPR051170 | Family | Neural and epithelial cell adhesion domain-containing protein | Interproscan |
| IPR003598 | Domain | Immunoglobulin subtype 2 | Interproscan |
| IPR003599 | Domain | Immunoglobulin subtype | Interproscan |
| IPR036179 | Homologous_superfamily | Immunoglobulin-like domain superfamily | Interproscan |
| IPR000885 | Domain | Fibrillar collagen, C-terminal | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12231 | CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0043005 | Cellular Component | neuron projection | Interproscan |
| GO:0005201 | Molecular Function | extracellular matrix structural constituent | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K13863 | SLC7A1, ATRC1; solute carrier family 7 (cationic amino acid transporter), member 1 | - | Transporters | ko02000 | deepkoala |
| Expression trend for OS493_034225-T1 global co-expression network |